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Hepatitis C Protocols
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Main description:

The identification of hepatitis C virus by Michael Houghton and his c- leagues at the Chiron Corporation nearly years ago represented a technical tour de force of modern molecular medicine. This breakthrough not only unearthed the causative agent of non-A non-B hepatitis that had eluded the best of scientists for more than 20 years, but also was symbolic of another chapter in the changing paradigm of modern science and medicine. The re- lutionary concept of identifying a pathogen without actually visualizing or detecting it will forever redefine the way we approach pathogenesis of d- eases whose cause is unknown. It is benefitting that this discovery treads on the heels of the human immunodeficiency pandemic, and parallels the ala- ing emergence of various microbial pestilences in the world. Despite the rapid advances in our understanding of the virus, there is much remaining to learn about it. This book highlights some of the important areas yet to be unraveled. As illustrated in this book, the marriage between basic science and clinical medicine is essential in our quest for these unknowns. The last decade has focused on the fundamentals of the virus; the next decade must underscore translational research, bridging clinical medicine and basic science with re- ization of fundamental knowledge to improve prevention, diagnosis, and tre- ment of viral hepatitis C.


Contents:

I. Detection of Anti-HCV in Serum

Detection of Anti-GOR Antibodies in HCV Infection

Confirmation of HCV Antibodies by the Line Immunoassay INNO-LIA HCV Ab III

II. Detection and Quantitation of HCV in Serum

Detection of HCV RNA in Serum by Reverse Transcriptase-PCR and Radiolabeled Liquid Hybridization

Detection of HCV RNA in Serum by Reverse Transcription Polymerase Chain Reaction (RT-PCR)

The Amplicor (R) HCV Tests for the Detection and Quantitation of Serum or Plasma HCV RNA

Quantification of HCV RNA in Clinical Specimens by Branched DNA (bDNA) Technology

Quality Control of the Polymerase Chain Reaction

Preparation of Genotype-Specific HCV RNA Transcripts for Assessing HCV Detection and Quantification Assays

III. Detection of HCV in Liver Tissue.

Detection of HCV RNA in Formalin-Fixed, Paraffin-Embedded Liver Tissue by RT-PCR

Quantification of HCV RNA in Liver Tissue by bDNA Assay

IV. HCV Genotypes.

Hepatitis C Virus: Types, Subtypes, and Beyond

Molecular Evolutionary Analysis: Its Application in the Study of Hepatitis C Virus

Genotyping by Type-Specific Primers That Can Type HCV Types 1-6

Genotyping Hepatitis C Virus by Type-Specific Primers for PCR Based on NS5 Region

Determination of HCV Genotypes by RFLP

HCV Genotyping by the Line Probe Assay INNO-LiPA HCV II

Serological Genotyping Using Synthetic Peptides Derived from the NS4 Region

Determination of HCV Quasispecies by Cloning and Sequencing

Detection of Hepatitis C Virus Quasispecies Heterogeneity by Single-Strand Conformational Polymorphism

Hepatitis C Virus Heteroduplex Tracking Assay: Application to Genotype Determination, Quasispecies Analysis, and Molecular Evolution Studies

V. Detection of HCV In Situ.

In Situ Detection of HCV: AnOverview

In Situ Detection of Hepatitis C Viral Antigens

In Situ Hybridization and the Detection and Localization of HCV RNA

The In Situ Detection of PCR-Amplified Hepatitis C RNA. Immunoelectron Microscopic Characterization of HCV

VI. Molecular Biologic Characterization.

Cloning and Assembly of Complex Libraries of Full-Length HCV cDNA Clones

Use of the Vaccinia Virus/T7 Expression System for Studying HCV Protein Processing

Use of a Discistronic Vector for the Quantitation of HCV IRES Activity

Expression and Dimerization of Hepatitis C Virus Core Protein in E. coli. Expression and Characterization of the HCV NS2 Protease

Expression and Characterization of HCV NS3 Protease

Expression and Characterization of the HCV NS3 Helicase Domain

Hepatitis C Virus RNA-Dependent RNA Polymerase (NS5B Polymerase)

Detection and Molecular Cloning of the Extreme 3'-End of HCV

In Vitro Stability of Hepatitis C Virus RNA

Methods for the Study of Sequence-Specific Binding of Proteins to the HCV RNA Genome

VII. HCV-Specific Immunologic Response.

Role of Immune Response in HCV

Determination of Hepatitis C Virus-Specific CD4+ T-Cell Activity in PBMC

Measurement of HCV-Specific CD8+ Cytotoxic T-Cell Activities in the Peripheral Blood by Europium Release Assay

Determination of HCV-Specific Bulk CD8+ Activity in Liver

Characterization of HCV-Specific Cytotoxic T-Lymphocytes from Liver Tissue

Production of Human Monoclonal Antibodies to Hepatitis C Virus and Their Characterization

VIII. In Vitro Culture Model.

Specific Detection of Negative Strand RNA of Hepatitis C Virus Using Chemical RNA Modification

Strand-Specific rTth RT-PCR for the Analysis of HCV Replication

Cell Culture Systems for the Detection of HCV Infection


PRODUCT DETAILS

ISBN-13: 9781489943484
Publisher: Springer (Humana Press Inc.)
Publication date: August, 2013
Pages: 621
Weight: 930g
Availability: Available
Subcategories: Infectious Diseases
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